miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Caligus clemensi



ABOUT THIS RECORD

ID: MNEST009765
species: Caligus clemensi
miRNA family: miR-3552
source: miRNEST

Taxonomy by NCBI:
Caligus clemensi Caligus Caligidae Siphonostomatoida Podoplea Neocopepoda Copepoda Maxillopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGATGCAGTCCCACTTCCCG

miRNA*
GGAAACAGGACTGCAACTAGG

mismatches: 5
bulges: 0

View larger
pre-miRNA
CGAGGAGGCAGAGGATGCAGTCCCACTTCCCGCGGGTAGCTTGGTGTAGATGGTCGCCCGCCCTAAGGGATCTATGAGGGCTTCGGATCGGAGGTGGCTG
TAGAACTGATAAATGTTTTTCCAAAGGTAGATCCAGTATCCGAGAACCAGTCCAGCAAGCACGGGAAACAGGACTGCAACTAGGACGTCCAC


dot-bracket secondary structure
...(((......((.((((((((...((((((......(((((.((....((((.((((.(((...)))........)))).((((((.(((....(((.
.(((((........)))))......)))...)))...))))))..))))...)).))))).))))))...)))))))).))......)))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;